PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN26867.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 312aa    MW: 35725.4 Da    PI: 4.7823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN26867.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.3e-071852251055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r RR++i ++ +eL +l+P       +K++ ae+L  A +Y+k Lq
  KHN26867.1 185 RERRRKITEKTQELGKLVPGG-----PKMNTAEMLHAAAKYVKFLQ 225
                 89*****************95.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.443175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-8183230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.47E-7185228No hitNo description
SuperFamilySSF474596.94E-11185235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-10185232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-5185225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MMALSTYSNC DTLQISNLET NTFHEAMPEE EVAAPNLQHF FSYLDESFFL SNTLLENYID  60
PTFGFLYPPG INHPYDPFTS LTSRDDIFPT HEDYNLLPCP KRKKCCYEEK QQHQEHVYSS  120
LQEITTPTLL SNLIDGFVVP YENCSSFQAE ELQQPVFYEV TQYGDPCVDL QCEKRGTKRP  180
ISPPRERRRK ITEKTQELGK LVPGGPKMNT AEMLHAAAKY VKFLQAQVGM LELMNILEED  240
KAEPPPENIH ALVVSPLVQE KLYTEERCFV PNGIVTTLTN HEDVHSRPTI LEDLKQLIGT  300
DIEKKQSKTK SS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150424e-42AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006586394.10.0PREDICTED: transcription factor bHLH52-like
TrEMBLA0A0B2R4U50.0A0A0B2R4U5_GLYSO; Transcription factor bHLH52
STRINGGLYMA08G17734.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.17e-30bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]